Commit Graph

153 Commits

Author SHA1 Message Date
Wirawan Purwanto
5666280a45 * Alias "|" operator to "+" operator. 2012-02-09 15:02:38 -05:00
Wirawan Purwanto
3698671bed * Added: fortran_bin_file.peek_next_rec_len() to fetch the next record length
while not advancing the read pointer to that record yet.
2012-01-30 16:04:17 -05:00
Wirawan Purwanto
050e2414ef * Added faster LDdec1 for 1-based indexing.
Tested through N=1000.
2012-01-26 10:46:55 -05:00
Wirawan Purwanto
d04ea8cbea * Completing jskip formula for LD that is analogous to the jskip formula for
UD matrix format.
2012-01-25 17:07:50 -05:00
Wirawan Purwanto
93a89d2606 * Created array indexer for "upper diagonal" indexing mode.
Apparently I was able to create the non-iterative version of UDdec (1-based
  indices).
2012-01-24 17:32:39 -05:00
Wirawan Purwanto
961a802326 * Keep a copy of my symmetric array indexer worksheet in GIT.
Original signature:
    -rw-r--r-- 1 wirawan0 wirawan0 1380 2010-04-27 15:55 symmetrix-array-index.py
    b873ece4610483b3cd5290c6ddbc7426  symmetrix-array-index.py
2012-01-24 17:28:10 -05:00
wirawan
7017fdc6af * Committing all dirty work to CVS. We are migrating to GIT.
Beware: changes in this commit may or may not work properly.
2011-10-06 19:15:05 +00:00
wirawan
8ebf1e422e * Add important warning. Maybe in the future we need to use operator "|"
and append the search paths to _list_?
2011-09-19 20:06:45 +00:00
wirawan
81e2ada60c * Allow comment character to be changed from "#" using the
instance.comment_char attribute.
2011-09-16 21:21:23 +00:00
wirawan
3f38cbfb34 * Allow printing of numpy.matrix objects. 2011-09-13 21:50:16 +00:00
wirawan
6fb10829e0 * Added Parameters._get_() method. 2011-09-12 21:58:43 +00:00
wirawan
aad559d86b * Class Parameters: important change of behavior for more safety to avoid
potential confusion.

* Detail of the important changes:

  1) by default now the function's local variables are not included in the
     lookup chain. Use _localvars_ flag if you insist on doing that; but
     be aware of the caveat (see Parameters' documentation).

  2) the default _kwparam_ and _userparam_ names are now passed on to the
     child Parameters object instead of the override values given through
     the _create_ function argument.
     Rationale: To begin with, the default names defined during the creation
     of the parent Parameters object should be used by *all* the relevant
     functions.
     Overrides should be regarded as exceptional rather than common cases.

  3) Value overrides (_kwparam_, _userparam_, etc.) in _create_ must now
     be specified in keyword=value manner rather than as positional argument.
     Rationale: Those overrides must be made conspicuous.
     The keyword=value approach also makes the code more resilient to minor
     API changes.
     All unnamed parameters are supposed to be low-priority defaults.
2011-09-09 18:58:48 +00:00
wirawan
4aff740f55 * Parameters value lookup: use try..except EAFP rather LBYL approach.
* Add simple checks for _p, _opts_ default arguments in case they are not
  indexable/dict-like objects. This is needed to avoid bizzare error messages
  later then the Parameters object is in use.
2011-09-07 15:05:54 +00:00
wirawan
1181a7e516 * Add descriptive error message. 2011-09-07 15:04:15 +00:00
wirawan
ceeafa811a * Added str_snippet() from MnO ipython script. 2011-09-07 15:03:54 +00:00
wirawan
c675077620 * Introducing self.lineno counter for line numbers (including the blanks
and comment lines).
2011-09-05 19:09:21 +00:00
wirawan
3f3c49df94 * Added file mode for file creation (default: "w"). 2011-09-02 15:07:47 +00:00
wirawan
cde48ef8de * wpylib.datetime: Date/time related module. 2011-09-01 15:34:03 +00:00
wirawan
3b522de2d6 * Added text_input.close() method. 2011-08-31 20:28:30 +00:00
wirawan
7d37c0b6ba * Internal upgrade to factor out reusable parts (for future upgrades). 2011-08-31 20:27:31 +00:00
wirawan
cf46af2bc2 * Simple function rename: make_unbound_method -> make_unbound_instance_method. 2011-08-31 18:26:18 +00:00
wirawan
77a15740cb * New module wpylib.debugging: Debugging tools. 2011-08-31 18:25:07 +00:00
wirawan
16c24736e4 * ipython-interactive-script.PY: skeleton for my ipython interactive script. 2011-08-19 17:23:10 +00:00
wirawan
1e3d236b1c * Completing initial version of interactive tool support: added interactive
mode detection (plain python, `python -i', and ipython supported),
  and my canned initialization for interactive python environment
  (like MYSELF, ARGV).
2011-07-18 15:48:52 +00:00
wirawan
47f6bced79 * wpylib.math.linalg: Added initial module for linear-algebra convenience
functions, objects, and submodules.
2011-07-14 19:00:59 +00:00
wirawan
94c1651586 * wpylib.py.im_weakref: weakref for instance method.
Copied from Linux Screen Reader project.
2011-06-08 15:50:07 +00:00
wirawan
424a9238bb * hacks.py: Added make_unbound_method to allow general function to participate
as hacked class methods.
2011-06-08 15:49:04 +00:00
wirawan
ceb8f35ec3 * Creating wpylib.py module to contain all python-level hacks.
Submodules are available for specialized and more complicated hacks.
2011-06-08 15:29:14 +00:00
wirawan
ad73b5af7f * Added set_next_proc() method to set which procedure should be called when
"next()" method dispatcher is called.

  This approach should get rid of the problem with circular reference which
  causes the text_input instance not be erasable because of strong reference
  to `self' in `self.next.im_self'.
2011-06-03 21:34:32 +00:00
wirawan
1bbaae135f * Added python-level advanced hack module which should hide all my dirty
tricks here.
2011-06-03 21:31:59 +00:00
wirawan
90c4f1b50b * Added vector_str and matrix_str generic function to print a matrix/vector
in space-seprated string format.
  The output is mainly for human consumption, not for machine re-reading
  (although it is possible to do so, in general).
2011-06-03 18:24:00 +00:00
wirawan
9e1c6f5868 * Commenting out the verbose printout. I think the module is robust now. 2011-05-12 14:51:02 +00:00
wirawan
90f1603499 * Added text_output as a converse facility to print out text stream to
a file.
  Useful for a shortened output statements in the code, and also for
  reroutable output (to stdout? to file? to both?) and flexible output
  kind.
2011-05-11 20:28:51 +00:00
wirawan
0531e4e511 * Add documentation for file_table. Add note for future hash: SHA1,256,... 2011-04-26 15:28:37 +00:00
wirawan
f42f2d82fa * __imul__ and __idiv__ should return the lvalue object itself. 2011-04-05 19:20:55 +00:00
wirawan
f1dee72d09 * Reset fitting debug level to 0. 2011-04-05 19:20:01 +00:00
wirawan
f64a3cfd8e * Using external login node on jaguar. 2011-03-10 20:18:27 +00:00
wirawan
6181d5588d * The sign of the scalar prefactor should not enter the uncertainty
(err) field!
2011-03-10 20:17:55 +00:00
wirawan
2a30c20a79 * Added dict_islice to support slicing while ignoring non-existing keys
in the source dict.
2011-03-10 20:16:58 +00:00
wirawan
26db0806ae * Make Struct available publicly in wpylib.params namespace (with the
'struct' name).
2011-03-10 19:22:37 +00:00
wirawan
3ac8e37b35 * Using the __dict__ attribute to store user-defined values.
Dict-like behavior is exemplified by this class although it is *not*
  derived from a dict.
2011-03-10 19:21:33 +00:00
wirawan
6d043f6721 * Simple clarification on example. 2011-03-10 19:20:35 +00:00
wirawan
d8984cf032 * Introducing "Struct", the base class for all structured datatypes.
This is the original implementation as found in Ca+4H2_Hstorage_iter.py .
2011-03-10 17:17:48 +00:00
wirawan
dbd36e0f1f * Added division of errorbar by a scalar. 2010-12-01 17:11:46 +00:00
wirawan
7dbef49f6c * Minor documentation edit. 2010-11-11 18:00:01 +00:00
wirawan
8363eb03bc * Adding more extensive documentation.
* Making minor changes to the expected method name (parse_text_file_ =>
  parse_file_).
2010-11-11 17:59:36 +00:00
wirawan
0bd6f56422 * Moving pyqmc.results.result_base module to wpylib.db.result_base for more
general uses.
2010-11-11 17:48:01 +00:00
wirawan
bceef1e601 * Adding more methods for fitting: fmin (simplex minimization).
I still have hard time making fitting routine work for me.
  But at least this one works for simple SHO fitting.
2010-11-05 02:28:20 +00:00
wirawan
592d6bd7c9 * Correcting recursive updates. 2010-10-29 15:58:51 +00:00
wirawan
c0f67e9992 * Ignore compiled modules. 2010-10-25 14:43:17 +00:00