* Imported launch_jupyter from Turing.
Originally furnished by Min Dong, 2019-03-01 14:30 EST.
This commit is contained in:
52
turing/calculations/launch_jupyter
Executable file
52
turing/calculations/launch_jupyter
Executable file
@@ -0,0 +1,52 @@
|
||||
#!/bin/bash -l
|
||||
|
||||
jupyter_output=$(mktemp ~/.jupyter_output.XXXX)
|
||||
|
||||
clean_up() {
|
||||
job_id=$(awk '/srun: job/ {print $3;exit}' $jupyter_output)
|
||||
scancel $job_id
|
||||
rm $jupyter_output
|
||||
}
|
||||
|
||||
trap clean_up EXIT
|
||||
|
||||
set -m
|
||||
|
||||
|
||||
if [ x"$PYTHON_VER" = x ]; then
|
||||
echo "Please load python and any needed python modules before launching juypter!"
|
||||
echo "Example: "
|
||||
echo " enable_lmod"
|
||||
echo " module load python/3.6 # 2.7/3.7 is also avaiable"
|
||||
exit 1
|
||||
fi
|
||||
|
||||
echo " * loading jupyter module"
|
||||
|
||||
enable_lmod
|
||||
module load python/$PYTHON_VER
|
||||
module load jupyter
|
||||
|
||||
echo " * launching jupyter notebook server"
|
||||
(srun -n 1 -c 2 -t 240 -J juypter jupyter-notebook --no-browser --port=$((8000 + $RANDOM % 1000)) --ip=0.0.0.0 2>&1 | tee $jupyter_output > /dev/null) &
|
||||
|
||||
echo
|
||||
echo " jupyter server will be on for 4 hour"
|
||||
echo " please do not close this window, or jupyter will be terminated immediately"
|
||||
echo
|
||||
|
||||
|
||||
sleep 10
|
||||
|
||||
job_id=$(awk '/srun: job/ {print $3;exit}' $jupyter_output)
|
||||
tokens=$(awk -F: '/ http:/ {print $3}' $jupyter_output)
|
||||
host=$(squeue -j $job_id -O NodeList -h | sed 's/ //g')
|
||||
url="http://$host:$tokens"
|
||||
|
||||
echo " * launching browser"
|
||||
(firefox $url 2>&1 )>/dev/null &
|
||||
|
||||
echo " if you closed browser, please use below to connect back"
|
||||
echo " $url"
|
||||
|
||||
wait
|
||||
Reference in New Issue
Block a user